Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
RNF20Q5VTR2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF20Q5VTR2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF20Q5VTR2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF20Q5VTR2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF20Q5VTR2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF20Q5VTR2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 DUX4L26-201ENST00000489078 1255 ntBASIC21.41■■□□□ 1.02
RNF20Q5VTR2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 GPR32P1-201ENST00000601788 811 ntBASIC21.41■■□□□ 1.02
RNF20Q5VTR2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RNF20Q5VTR2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 LINC00896-202ENST00000609602 2128 ntBASIC21.4■■□□□ 1.02
RNF20Q5VTR2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 AL353692.3-201ENST00000407031 1396 ntBASIC21.4■■□□□ 1.02
RNF20Q5VTR2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.4■■□□□ 1.02
RNF20Q5VTR2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RNF20Q5VTR2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF20Q5VTR2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.39■■□□□ 1.02
RNF20Q5VTR2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF20Q5VTR2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.39■■□□□ 1.02
RNF20Q5VTR2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.39■■□□□ 1.02
RNF20Q5VTR2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RNF20Q5VTR2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.39■■□□□ 1.02
RNF20Q5VTR2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 VENTXP5-201ENST00000523979 775 ntBASIC21.39■■□□□ 1.01
RNF20Q5VTR2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.39■■□□□ 1.01
RNF20Q5VTR2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF20Q5VTR2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF20Q5VTR2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms