Protein–RNA interactions for Protein: P58557

YBEY, Endoribonuclease YbeY, humanhuman

Predicted RBP Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBEYP58557 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.23■□□□□ 0.51
YBEYP58557 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.23■□□□□ 0.51
YBEYP58557 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.23■□□□□ 0.51
YBEYP58557 MINOS1P3-201ENST00000457048 203 ntBASIC18.23■□□□□ 0.51
YBEYP58557 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.23■□□□□ 0.51
YBEYP58557 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.23■□□□□ 0.51
YBEYP58557 MIR3652-201ENST00000579335 131 ntBASIC18.23■□□□□ 0.51
YBEYP58557 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.23■□□□□ 0.51
YBEYP58557 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.23■□□□□ 0.51
YBEYP58557 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
YBEYP58557 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.23■□□□□ 0.51
YBEYP58557 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.23■□□□□ 0.51
YBEYP58557 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBEYP58557 AC008764.6-201ENST00000595909 2069 ntBASIC18.22■□□□□ 0.51
YBEYP58557 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
YBEYP58557 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
YBEYP58557 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.22■□□□□ 0.51
YBEYP58557 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
YBEYP58557 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
YBEYP58557 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
YBEYP58557 POM121L3P-201ENST00000419331 1163 ntBASIC18.22■□□□□ 0.51
YBEYP58557 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.22■□□□□ 0.51
YBEYP58557 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 NUS1P1-201ENST00000446295 882 ntBASIC18.22■□□□□ 0.51
YBEYP58557 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.22■□□□□ 0.51
YBEYP58557 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.22■□□□□ 0.51
YBEYP58557 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.22■□□□□ 0.51
YBEYP58557 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
YBEYP58557 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
YBEYP58557 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.22■□□□□ 0.51
YBEYP58557 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.22■□□□□ 0.51
YBEYP58557 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.22■□□□□ 0.51
YBEYP58557 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
YBEYP58557 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBEYP58557 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 AC009949.1-201ENST00000623048 1830 ntBASIC18.21■□□□□ 0.51
YBEYP58557 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
YBEYP58557 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.21■□□□□ 0.51
YBEYP58557 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.21■□□□□ 0.51
YBEYP58557 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.21■□□□□ 0.51
YBEYP58557 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
YBEYP58557 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.21■□□□□ 0.51
YBEYP58557 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.21■□□□□ 0.51
YBEYP58557 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.21■□□□□ 0.51
YBEYP58557 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
YBEYP58557 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
YBEYP58557 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBEYP58557 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.21■□□□□ 0.51
YBEYP58557 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
YBEYP58557 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBEYP58557 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBEYP58557 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBEYP58557 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YBEYP58557 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YBEYP58557 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms