Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 Z83836.1-201ENST00000624605 1642 ntBASIC16.59■□□□□ 0.25
PER3P56645 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PER3P56645 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PER3P56645 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PER3P56645 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.59■□□□□ 0.25
PER3P56645 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.59■□□□□ 0.25
PER3P56645 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PER3P56645 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.59■□□□□ 0.25
PER3P56645 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PER3P56645 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.59■□□□□ 0.25
PER3P56645 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.59■□□□□ 0.25
PER3P56645 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.59■□□□□ 0.25
PER3P56645 AP003733.1-201ENST00000491725 852 ntBASIC16.59■□□□□ 0.25
PER3P56645 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PER3P56645 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.59■□□□□ 0.25
PER3P56645 AC139530.3-201ENST00000620344 690 ntBASIC16.59■□□□□ 0.25
PER3P56645 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PER3P56645 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PER3P56645 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PER3P56645 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
PER3P56645 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PER3P56645 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PER3P56645 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PER3P56645 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PER3P56645 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PER3P56645 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PER3P56645 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PER3P56645 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PER3P56645 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.59■□□□□ 0.25
PER3P56645 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PER3P56645 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PER3P56645 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PER3P56645 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PER3P56645 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PER3P56645 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.58■□□□□ 0.25
PER3P56645 AC067852.2-201ENST00000590513 2313 ntBASIC16.58■□□□□ 0.25
PER3P56645 AC124067.4-201ENST00000519691 2379 ntBASIC16.58■□□□□ 0.25
PER3P56645 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PER3P56645 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
PER3P56645 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PER3P56645 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.58■□□□□ 0.25
PER3P56645 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
PER3P56645 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PER3P56645 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.58■□□□□ 0.24
PER3P56645 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.58■□□□□ 0.24
PER3P56645 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.58■□□□□ 0.24
PER3P56645 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.58■□□□□ 0.24
PER3P56645 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.58■□□□□ 0.24
PER3P56645 SAPCD2P3-201ENST00000455031 850 ntBASIC16.58■□□□□ 0.24
PER3P56645 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.58■□□□□ 0.24
PER3P56645 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.58■□□□□ 0.24
PER3P56645 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.58■□□□□ 0.24
PER3P56645 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.58■□□□□ 0.24
PER3P56645 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.58■□□□□ 0.24
PER3P56645 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.58■□□□□ 0.24
PER3P56645 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.58■□□□□ 0.24
PER3P56645 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
PER3P56645 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.58■□□□□ 0.24
PER3P56645 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.58■□□□□ 0.24
PER3P56645 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.58■□□□□ 0.24
PER3P56645 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.58■□□□□ 0.24
PER3P56645 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PER3P56645 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.58■□□□□ 0.24
PER3P56645 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PER3P56645 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.58■□□□□ 0.24
PER3P56645 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PER3P56645 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.58■□□□□ 0.24
PER3P56645 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PER3P56645 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PER3P56645 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PER3P56645 KRT16P4-201ENST00000453883 522 ntBASIC16.57■□□□□ 0.24
PER3P56645 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms