Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 WWOX-216ENST00000569818 525 ntBASIC16.86■□□□□ 0.29
CLK1P49759 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.86■□□□□ 0.29
CLK1P49759 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLK1P49759 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.86■□□□□ 0.29
CLK1P49759 AC145285.6-201ENST00000604632 637 ntBASIC16.86■□□□□ 0.29
CLK1P49759 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.86■□□□□ 0.29
CLK1P49759 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CLK1P49759 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.86■□□□□ 0.29
CLK1P49759 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK1P49759 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK1P49759 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLK1P49759 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK1P49759 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK1P49759 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLK1P49759 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK1P49759 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK1P49759 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.86■□□□□ 0.29
CLK1P49759 AC135776.1-201ENST00000319817 2481 ntBASIC16.86■□□□□ 0.29
CLK1P49759 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.86■□□□□ 0.29
CLK1P49759 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLK1P49759 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLK1P49759 MTMR9LP-203ENST00000426597 1545 ntBASIC16.86■□□□□ 0.29
CLK1P49759 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.85■□□□□ 0.29
CLK1P49759 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 AL645608.8-201ENST00000606034 2086 ntBASIC16.85■□□□□ 0.29
CLK1P49759 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLK1P49759 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLK1P49759 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.85■□□□□ 0.29
CLK1P49759 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.85■□□□□ 0.29
CLK1P49759 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.85■□□□□ 0.29
CLK1P49759 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.85■□□□□ 0.29
CLK1P49759 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.85■□□□□ 0.29
CLK1P49759 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CLK1P49759 KRT18P41-201ENST00000518924 1277 ntBASIC16.85■□□□□ 0.29
CLK1P49759 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.85■□□□□ 0.29
CLK1P49759 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.85■□□□□ 0.29
CLK1P49759 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.85■□□□□ 0.29
CLK1P49759 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CLK1P49759 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.85■□□□□ 0.29
CLK1P49759 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.85■□□□□ 0.29
CLK1P49759 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 KRT8P7-201ENST00000533003 1432 ntBASIC16.85■□□□□ 0.29
CLK1P49759 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.85■□□□□ 0.29
CLK1P49759 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CLK1P49759 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.85■□□□□ 0.29
CLK1P49759 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CLK1P49759 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLK1P49759 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CLK1P49759 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CLK1P49759 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.84■□□□□ 0.29
CLK1P49759 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CLK1P49759 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.84■□□□□ 0.29
CLK1P49759 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
CLK1P49759 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.84■□□□□ 0.29
CLK1P49759 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.84■□□□□ 0.29
CLK1P49759 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.84■□□□□ 0.29
CLK1P49759 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.84■□□□□ 0.29
CLK1P49759 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.84■□□□□ 0.29
CLK1P49759 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.84■□□□□ 0.29
CLK1P49759 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CLK1P49759 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.84■□□□□ 0.29
CLK1P49759 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLK1P49759 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.84■□□□□ 0.29
CLK1P49759 AC112777.1-201ENST00000540175 1423 ntBASIC16.84■□□□□ 0.29
CLK1P49759 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.84■□□□□ 0.29
CLK1P49759 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.84■□□□□ 0.29
CLK1P49759 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLK1P49759 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLK1P49759 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.84■□□□□ 0.29
CLK1P49759 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLK1P49759 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms