Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CBX5P45973 AC098934.4-201ENST00000564127 592 ntBASIC15.46■□□□□ 0.07
CBX5P45973 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.46■□□□□ 0.07
CBX5P45973 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.46■□□□□ 0.07
CBX5P45973 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.46■□□□□ 0.07
CBX5P45973 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CBX5P45973 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CBX5P45973 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.46■□□□□ 0.07
CBX5P45973 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CBX5P45973 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CBX5P45973 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CBX5P45973 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
CBX5P45973 AL023806.1-201ENST00000603994 1649 ntBASIC15.46■□□□□ 0.06
CBX5P45973 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CBX5P45973 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.46■□□□□ 0.06
CBX5P45973 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CBX5P45973 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CBX5P45973 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.46■□□□□ 0.06
CBX5P45973 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CBX5P45973 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CBX5P45973 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CBX5P45973 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CBX5P45973 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CBX5P45973 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 AC063926.3-201ENST00000624734 5658 ntBASIC15.45■□□□□ 0.06
CBX5P45973 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.45■□□□□ 0.06
CBX5P45973 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.45■□□□□ 0.06
CBX5P45973 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.45■□□□□ 0.06
CBX5P45973 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 AC239809.2-201ENST00000415381 517 ntBASIC15.45■□□□□ 0.06
CBX5P45973 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.45■□□□□ 0.06
CBX5P45973 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.45■□□□□ 0.06
CBX5P45973 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.45■□□□□ 0.06
CBX5P45973 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CBX5P45973 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.45■□□□□ 0.06
CBX5P45973 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
CBX5P45973 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
CBX5P45973 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CBX5P45973 PCDHA1-201ENST00000378133 2726 ntBASIC15.45■□□□□ 0.06
CBX5P45973 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.45■□□□□ 0.06
CBX5P45973 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.44■□□□□ 0.06
CBX5P45973 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.44■□□□□ 0.06
CBX5P45973 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.44■□□□□ 0.06
CBX5P45973 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CBX5P45973 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
CBX5P45973 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CBX5P45973 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CBX5P45973 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CBX5P45973 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.44■□□□□ 0.06
CBX5P45973 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 KRASP1-201ENST00000407852 552 ntBASIC15.44■□□□□ 0.06
CBX5P45973 KSR1P1-201ENST00000446298 240 ntBASIC15.44■□□□□ 0.06
CBX5P45973 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.44■□□□□ 0.06
CBX5P45973 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CBX5P45973 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.44■□□□□ 0.06
CBX5P45973 AC069544.1-201ENST00000609399 999 ntBASIC15.44■□□□□ 0.06
CBX5P45973 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.44■□□□□ 0.06
CBX5P45973 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CBX5P45973 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CBX5P45973 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.44■□□□□ 0.06
CBX5P45973 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CBX5P45973 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.44■□□□□ 0.06
CBX5P45973 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CBX5P45973 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms