Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF9P41273 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF9P41273 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF9P41273 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TNFSF9P41273 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
TNFSF9P41273 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFSF9P41273 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFSF9P41273 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFSF9P41273 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF9P41273 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.36■□□□□ 0.69
TNFSF9P41273 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.36■□□□□ 0.69
TNFSF9P41273 POM121L3P-201ENST00000419331 1163 ntBASIC19.36■□□□□ 0.69
TNFSF9P41273 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFSF9P41273 AC009533.2-201ENST00000543664 586 ntBASIC19.36■□□□□ 0.69
TNFSF9P41273 MIR5100-201ENST00000579544 119 ntBASIC19.36■□□□□ 0.69
TNFSF9P41273 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF9P41273 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.36■□□□□ 0.69
TNFSF9P41273 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF9P41273 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF9P41273 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF9P41273 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF9P41273 KRT18P55-202ENST00000578578 1546 ntBASIC19.35■□□□□ 0.69
TNFSF9P41273 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFSF9P41273 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TNFSF9P41273 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
TNFSF9P41273 AC096633.1-201ENST00000422446 749 ntBASIC19.35■□□□□ 0.69
TNFSF9P41273 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.35■□□□□ 0.69
TNFSF9P41273 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.35■□□□□ 0.69
TNFSF9P41273 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFSF9P41273 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.35■□□□□ 0.69
TNFSF9P41273 AC011467.2-201ENST00000598425 242 ntBASIC19.35■□□□□ 0.69
TNFSF9P41273 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFSF9P41273 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TNFSF9P41273 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.35■□□□□ 0.69
TNFSF9P41273 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFSF9P41273 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFSF9P41273 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF9P41273 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFSF9P41273 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TNFSF9P41273 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF9P41273 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF9P41273 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.34■□□□□ 0.69
TNFSF9P41273 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TNFSF9P41273 INTS4P1-201ENST00000438455 1935 ntBASIC19.34■□□□□ 0.69
TNFSF9P41273 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 KRT16P4-201ENST00000453883 522 ntBASIC19.34■□□□□ 0.69
TNFSF9P41273 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.34■□□□□ 0.69
TNFSF9P41273 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFSF9P41273 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TNFSF9P41273 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF9P41273 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFSF9P41273 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TNFSF9P41273 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 RNF165-205ENST00000588679 2904 ntBASIC19.34■□□□□ 0.69
TNFSF9P41273 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TNFSF9P41273 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TNFSF9P41273 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF9P41273 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TNFSF9P41273 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.33■□□□□ 0.69
TNFSF9P41273 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TNFSF9P41273 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFSF9P41273 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.33■□□□□ 0.69
TNFSF9P41273 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.33■□□□□ 0.69
TNFSF9P41273 AC097374.2-201ENST00000618617 1306 ntBASIC19.33■□□□□ 0.69
TNFSF9P41273 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFSF9P41273 AKR1C7P-201ENST00000305623 895 ntBASIC19.33■□□□□ 0.68
TNFSF9P41273 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.33■□□□□ 0.68
TNFSF9P41273 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TNFSF9P41273 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF9P41273 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.33■□□□□ 0.68
TNFSF9P41273 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF9P41273 EMBP1-201ENST00000458200 901 ntBASIC19.33■□□□□ 0.68
TNFSF9P41273 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms