Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
SLC6A4P31645 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A4P31645 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SLC6A4P31645 AF238378.1-201ENST00000526806 358 ntBASIC18.36■□□□□ 0.53
SLC6A4P31645 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A4P31645 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SLC6A4P31645 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A4P31645 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A4P31645 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLC6A4P31645 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC6A4P31645 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 AC138028.4-201ENST00000564984 1845 ntBASIC18.35■□□□□ 0.53
SLC6A4P31645 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC6A4P31645 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC6A4P31645 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 FAAHP1-202ENST00000446499 1238 ntBASIC18.35■□□□□ 0.53
SLC6A4P31645 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC6A4P31645 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.35■□□□□ 0.53
SLC6A4P31645 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A4P31645 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC6A4P31645 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC6A4P31645 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.35■□□□□ 0.53
SLC6A4P31645 AC104692.2-201ENST00000603054 253 ntBASIC18.35■□□□□ 0.53
SLC6A4P31645 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC6A4P31645 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A4P31645 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A4P31645 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A4P31645 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.35■□□□□ 0.53
SLC6A4P31645 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A4P31645 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A4P31645 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SLC6A4P31645 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A4P31645 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A4P31645 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC6A4P31645 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A4P31645 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A4P31645 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC6A4P31645 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A4P31645 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A4P31645 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 AC026396.1-201ENST00000419388 421 ntBASIC18.34■□□□□ 0.53
SLC6A4P31645 SAPCD2P3-201ENST00000455031 850 ntBASIC18.34■□□□□ 0.53
SLC6A4P31645 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A4P31645 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC6A4P31645 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A4P31645 AP001269.4-201ENST00000609611 512 ntBASIC18.34■□□□□ 0.53
SLC6A4P31645 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC6A4P31645 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A4P31645 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC6A4P31645 AC009949.1-201ENST00000623048 1830 ntBASIC18.34■□□□□ 0.53
SLC6A4P31645 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A4P31645 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SLC6A4P31645 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A4P31645 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SLC6A4P31645 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A4P31645 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A4P31645 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A4P31645 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A4P31645 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A4P31645 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A4P31645 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC6A4P31645 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC6A4P31645 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.33■□□□□ 0.53
SLC6A4P31645 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SLC6A4P31645 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC6A4P31645 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A4P31645 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A4P31645 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms