Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.02■□□□□ 0.32
MMP11P24347 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.02■□□□□ 0.32
MMP11P24347 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.02■□□□□ 0.32
MMP11P24347 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.02■□□□□ 0.32
MMP11P24347 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.02■□□□□ 0.32
MMP11P24347 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
MMP11P24347 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP11P24347 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP11P24347 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP11P24347 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP11P24347 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP11P24347 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP11P24347 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
MMP11P24347 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MMP11P24347 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MMP11P24347 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP11P24347 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP11P24347 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP11P24347 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP11P24347 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP11P24347 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP11P24347 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP11P24347 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MMP11P24347 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP11P24347 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.01■□□□□ 0.31
MMP11P24347 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP11P24347 AC099336.1-202ENST00000602961 463 ntBASIC17.01■□□□□ 0.31
MMP11P24347 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP11P24347 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP11P24347 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP11P24347 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP11P24347 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP11P24347 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP11P24347 AC093677.2-201ENST00000600169 1863 ntBASIC17.01■□□□□ 0.31
MMP11P24347 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
MMP11P24347 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP11P24347 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP11P24347 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
MMP11P24347 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17■□□□□ 0.31
MMP11P24347 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17■□□□□ 0.31
MMP11P24347 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
MMP11P24347 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17■□□□□ 0.31
MMP11P24347 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17■□□□□ 0.31
MMP11P24347 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MMP11P24347 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17■□□□□ 0.31
MMP11P24347 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17■□□□□ 0.31
MMP11P24347 AC138894.3-201ENST00000603787 634 ntBASIC17■□□□□ 0.31
MMP11P24347 AL024508.2-201ENST00000607749 1894 ntBASIC17■□□□□ 0.31
MMP11P24347 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17■□□□□ 0.31
MMP11P24347 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17■□□□□ 0.31
MMP11P24347 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP11P24347 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP11P24347 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP11P24347 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP11P24347 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP11P24347 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 AC099343.3-201ENST00000605834 2503 ntBASIC16.99■□□□□ 0.31
MMP11P24347 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
MMP11P24347 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP11P24347 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
MMP11P24347 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP11P24347 AL353801.3-201ENST00000609898 542 ntBASIC16.99■□□□□ 0.31
MMP11P24347 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 NSUN5P1-202ENST00000421140 1535 ntBASIC16.99■□□□□ 0.31
MMP11P24347 NSUN5P2-203ENST00000457352 1529 ntBASIC16.99■□□□□ 0.31
MMP11P24347 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MMP11P24347 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MMP11P24347 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 ESPNP-201ENST00000270691 2015 ntBASIC16.99■□□□□ 0.31
MMP11P24347 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MMP11P24347 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MMP11P24347 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP11P24347 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms