Protein–RNA interactions for Protein: P22694

PRKACB, cAMP-dependent protein kinase catalytic subunit beta, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKACBP22694 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKACBP22694 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.83■□□□□ 0.12
PRKACBP22694 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKACBP22694 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.83■□□□□ 0.12
PRKACBP22694 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKACBP22694 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
PRKACBP22694 AC113410.3-201ENST00000623366 203 ntBASIC15.83■□□□□ 0.12
PRKACBP22694 AL049637.2-201ENST00000641778 930 ntBASIC15.83■□□□□ 0.12
PRKACBP22694 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
PRKACBP22694 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PRKACBP22694 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PRKACBP22694 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.83■□□□□ 0.12
PRKACBP22694 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKACBP22694 AC005052.1-201ENST00000625181 2492 ntBASIC15.83■□□□□ 0.12
PRKACBP22694 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.83■□□□□ 0.12
PRKACBP22694 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.82■□□□□ 0.12
PRKACBP22694 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.82■□□□□ 0.12
PRKACBP22694 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 GCSHP5-201ENST00000443090 522 ntBASIC15.82■□□□□ 0.12
PRKACBP22694 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 AP005242.2-201ENST00000580065 1175 ntBASIC15.82■□□□□ 0.12
PRKACBP22694 REXO1L10P-201ENST00000615707 1290 ntBASIC15.82■□□□□ 0.12
PRKACBP22694 REXO1L12P-201ENST00000622156 912 ntBASIC15.82■□□□□ 0.12
PRKACBP22694 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 KRT8P50-201ENST00000562022 1438 ntBASIC15.82■□□□□ 0.12
PRKACBP22694 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.82■□□□□ 0.12
PRKACBP22694 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PRKACBP22694 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.82■□□□□ 0.12
PRKACBP22694 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.82■□□□□ 0.12
PRKACBP22694 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PRKACBP22694 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRKACBP22694 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.81■□□□□ 0.12
PRKACBP22694 ESPNP-201ENST00000270691 2015 ntBASIC15.81■□□□□ 0.12
PRKACBP22694 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PRKACBP22694 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRKACBP22694 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.81■□□□□ 0.12
PRKACBP22694 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms