Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTSBP07858 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CTSBP07858 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CTSBP07858 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
CTSBP07858 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CTSBP07858 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CTSBP07858 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.94■□□□□ 0.3
CTSBP07858 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CTSBP07858 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CTSBP07858 AC096633.1-201ENST00000422446 749 ntBASIC16.94■□□□□ 0.3
CTSBP07858 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.94■□□□□ 0.3
CTSBP07858 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.94■□□□□ 0.3
CTSBP07858 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSBP07858 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CTSBP07858 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSBP07858 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.94■□□□□ 0.3
CTSBP07858 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSBP07858 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CTSBP07858 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.94■□□□□ 0.3
CTSBP07858 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSBP07858 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSBP07858 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CTSBP07858 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.94■□□□□ 0.3
CTSBP07858 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CTSBP07858 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.94■□□□□ 0.3
CTSBP07858 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSBP07858 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSBP07858 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.94■□□□□ 0.3
CTSBP07858 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSBP07858 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.93■□□□□ 0.3
CTSBP07858 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.93■□□□□ 0.3
CTSBP07858 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CTSBP07858 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.93■□□□□ 0.3
CTSBP07858 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.93■□□□□ 0.3
CTSBP07858 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CTSBP07858 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.93■□□□□ 0.3
CTSBP07858 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.93■□□□□ 0.3
CTSBP07858 SLC25A6P4-201ENST00000586535 553 ntBASIC16.93■□□□□ 0.3
CTSBP07858 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.93■□□□□ 0.3
CTSBP07858 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.93■□□□□ 0.3
CTSBP07858 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSBP07858 AC148477.8-201ENST00000624298 468 ntBASIC16.93■□□□□ 0.3
CTSBP07858 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSBP07858 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSBP07858 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 AC007613.1-201ENST00000572811 2597 ntBASIC16.93■□□□□ 0.3
CTSBP07858 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSBP07858 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 AC020763.4-201ENST00000623414 4170 ntBASIC16.93■□□□□ 0.3
CTSBP07858 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CTSBP07858 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.93■□□□□ 0.3
CTSBP07858 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 AC022898.2-201ENST00000616822 1312 ntBASIC16.93■□□□□ 0.3
CTSBP07858 AC097374.2-201ENST00000618617 1306 ntBASIC16.93■□□□□ 0.3
CTSBP07858 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.93■□□□□ 0.3
CTSBP07858 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSBP07858 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CTSBP07858 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSBP07858 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSBP07858 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms