Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16■□□□□ 0.15
CLDN1O95832 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN1O95832 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 HR-201ENST00000312841 5351 ntTSL 5 BASIC16■□□□□ 0.15
CLDN1O95832 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN1O95832 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CLDN1O95832 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CLDN1O95832 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CLDN1O95832 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN1O95832 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.99■□□□□ 0.15
CLDN1O95832 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN1O95832 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN1O95832 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN1O95832 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN1O95832 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.99■□□□□ 0.15
CLDN1O95832 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN1O95832 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN1O95832 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.99■□□□□ 0.15
CLDN1O95832 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN1O95832 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
CLDN1O95832 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN1O95832 AC025062.2-201ENST00000605477 670 ntBASIC15.99■□□□□ 0.15
CLDN1O95832 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN1O95832 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 AP005117.1-201ENST00000584346 1413 ntBASIC15.99■□□□□ 0.15
CLDN1O95832 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN1O95832 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN1O95832 AC093503.3-201ENST00000624917 2352 ntBASIC15.99■□□□□ 0.15
CLDN1O95832 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN1O95832 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLDN1O95832 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN1O95832 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDN1O95832 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.99■□□□□ 0.15
CLDN1O95832 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN1O95832 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CLDN1O95832 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN1O95832 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CLDN1O95832 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN1O95832 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN1O95832 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.98■□□□□ 0.15
CLDN1O95832 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.98■□□□□ 0.15
CLDN1O95832 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN1O95832 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CLDN1O95832 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CLDN1O95832 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN1O95832 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 AC008735.5-201ENST00000623544 497 ntBASIC15.98■□□□□ 0.15
CLDN1O95832 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN1O95832 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
CLDN1O95832 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.98■□□□□ 0.15
CLDN1O95832 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CLDN1O95832 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN1O95832 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CLDN1O95832 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CLDN1O95832 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CLDN1O95832 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN1O95832 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN1O95832 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 AC112777.1-201ENST00000540175 1423 ntBASIC15.97■□□□□ 0.15
CLDN1O95832 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN1O95832 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CLDN1O95832 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms