Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.71□□□□□ -0.05
SCAF4O95104 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.71□□□□□ -0.05
SCAF4O95104 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.71□□□□□ -0.05
SCAF4O95104 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.71□□□□□ -0.05
SCAF4O95104 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.71□□□□□ -0.05
SCAF4O95104 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.71□□□□□ -0.05
SCAF4O95104 AC068418.2-201ENST00000577309 3703 ntBASIC14.71□□□□□ -0.05
SCAF4O95104 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SCAF4O95104 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SCAF4O95104 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SCAF4O95104 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.71□□□□□ -0.05
SCAF4O95104 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SCAF4O95104 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.71□□□□□ -0.05
SCAF4O95104 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.71□□□□□ -0.05
SCAF4O95104 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 AP002982.1-201ENST00000492365 877 ntBASIC14.71□□□□□ -0.05
SCAF4O95104 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.71□□□□□ -0.05
SCAF4O95104 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SCAF4O95104 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SCAF4O95104 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.71□□□□□ -0.05
SCAF4O95104 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SCAF4O95104 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SCAF4O95104 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
SCAF4O95104 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.71□□□□□ -0.06
SCAF4O95104 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SCAF4O95104 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.71□□□□□ -0.06
SCAF4O95104 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
SCAF4O95104 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SCAF4O95104 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SCAF4O95104 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.7□□□□□ -0.06
SCAF4O95104 PP12613-201ENST00000424958 2230 ntBASIC14.7□□□□□ -0.06
SCAF4O95104 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SCAF4O95104 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SCAF4O95104 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.7□□□□□ -0.06
SCAF4O95104 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.7□□□□□ -0.06
SCAF4O95104 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SCAF4O95104 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SCAF4O95104 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 KRT8P11-201ENST00000409686 1436 ntBASIC14.7□□□□□ -0.06
SCAF4O95104 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SCAF4O95104 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SCAF4O95104 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.7□□□□□ -0.06
SCAF4O95104 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SCAF4O95104 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 MIR718-201ENST00000390190 70 ntBASIC14.7□□□□□ -0.06
SCAF4O95104 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 RPS2P4-201ENST00000476944 856 ntBASIC14.7□□□□□ -0.06
SCAF4O95104 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.7□□□□□ -0.06
SCAF4O95104 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.7□□□□□ -0.06
SCAF4O95104 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.7□□□□□ -0.06
SCAF4O95104 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SCAF4O95104 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SCAF4O95104 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SCAF4O95104 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.7□□□□□ -0.06
SCAF4O95104 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.7□□□□□ -0.06
SCAF4O95104 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
SCAF4O95104 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SCAF4O95104 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
SCAF4O95104 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.7□□□□□ -0.06
SCAF4O95104 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCAF4O95104 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.69□□□□□ -0.06
SCAF4O95104 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SCAF4O95104 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SCAF4O95104 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms