Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
VEGFDO43915 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.55■□□□□ 0.4
VEGFDO43915 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.55■□□□□ 0.4
VEGFDO43915 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.55■□□□□ 0.4
VEGFDO43915 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.55■□□□□ 0.4
VEGFDO43915 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.55■□□□□ 0.4
VEGFDO43915 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.55■□□□□ 0.4
VEGFDO43915 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 FAM220CP-201ENST00000395253 831 ntBASIC17.55■□□□□ 0.4
VEGFDO43915 AC007967.3-201ENST00000434308 558 ntBASIC17.55■□□□□ 0.4
VEGFDO43915 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.55■□□□□ 0.4
VEGFDO43915 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.55■□□□□ 0.4
VEGFDO43915 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.55■□□□□ 0.4
VEGFDO43915 MIR5100-201ENST00000579544 119 ntBASIC17.55■□□□□ 0.4
VEGFDO43915 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.55■□□□□ 0.4
VEGFDO43915 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VEGFDO43915 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VEGFDO43915 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.55■□□□□ 0.4
VEGFDO43915 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VEGFDO43915 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
VEGFDO43915 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
VEGFDO43915 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VEGFDO43915 AL390961.4-201ENST00000623958 2535 ntBASIC17.55■□□□□ 0.4
VEGFDO43915 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
VEGFDO43915 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.55■□□□□ 0.4
VEGFDO43915 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VEGFDO43915 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VEGFDO43915 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
VEGFDO43915 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.54■□□□□ 0.4
VEGFDO43915 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
VEGFDO43915 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
VEGFDO43915 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.54■□□□□ 0.4
VEGFDO43915 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
VEGFDO43915 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.54■□□□□ 0.4
VEGFDO43915 RCN1P2-201ENST00000398357 915 ntBASIC17.54■□□□□ 0.4
VEGFDO43915 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.54■□□□□ 0.4
VEGFDO43915 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.54■□□□□ 0.4
VEGFDO43915 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.54■□□□□ 0.4
VEGFDO43915 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.54■□□□□ 0.4
VEGFDO43915 AC111152.3-201ENST00000569699 673 ntBASIC17.54■□□□□ 0.4
VEGFDO43915 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.54■□□□□ 0.4
VEGFDO43915 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
VEGFDO43915 AL591684.3-201ENST00000605187 298 ntBASIC17.54■□□□□ 0.4
VEGFDO43915 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.54■□□□□ 0.4
VEGFDO43915 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.54■□□□□ 0.4
VEGFDO43915 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VEGFDO43915 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.54■□□□□ 0.4
VEGFDO43915 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
VEGFDO43915 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.54■□□□□ 0.4
VEGFDO43915 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.54■□□□□ 0.4
VEGFDO43915 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
VEGFDO43915 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VEGFDO43915 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.54■□□□□ 0.4
VEGFDO43915 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.54■□□□□ 0.4
VEGFDO43915 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
VEGFDO43915 INTS4P1-201ENST00000438455 1935 ntBASIC17.53■□□□□ 0.4
VEGFDO43915 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.53■□□□□ 0.4
VEGFDO43915 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VEGFDO43915 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.53■□□□□ 0.4
VEGFDO43915 COX5BP2-201ENST00000392354 334 ntBASIC17.53■□□□□ 0.4
VEGFDO43915 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.53■□□□□ 0.4
VEGFDO43915 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.53■□□□□ 0.4
VEGFDO43915 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
VEGFDO43915 AC122714.2-201ENST00000502787 707 ntBASIC17.53■□□□□ 0.4
VEGFDO43915 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms