Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 TPSP2-201ENST00000561760 610 ntBASIC17.29■□□□□ 0.36
SLC28A2O43868 AC064862.7-201ENST00000604520 867 ntBASIC17.29■□□□□ 0.36
SLC28A2O43868 AL355385.1-201ENST00000606123 409 ntBASIC17.29■□□□□ 0.36
SLC28A2O43868 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC28A2O43868 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 AC005332.8-201ENST00000622750 2735 ntBASIC17.29■□□□□ 0.36
SLC28A2O43868 AC135776.1-201ENST00000319817 2481 ntBASIC17.29■□□□□ 0.36
SLC28A2O43868 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC28A2O43868 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC28A2O43868 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC28A2O43868 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC28A2O43868 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC28A2O43868 AC022898.2-201ENST00000616822 1312 ntBASIC17.28■□□□□ 0.36
SLC28A2O43868 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC28A2O43868 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC28A2O43868 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SLC28A2O43868 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC28A2O43868 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SLC28A2O43868 DRAXINP1-201ENST00000437611 948 ntBASIC17.28■□□□□ 0.36
SLC28A2O43868 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.28■□□□□ 0.36
SLC28A2O43868 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 AP001005.1-201ENST00000571755 1248 ntBASIC17.28■□□□□ 0.36
SLC28A2O43868 AL139424.1-201ENST00000607572 797 ntBASIC17.28■□□□□ 0.36
SLC28A2O43868 AL353801.3-201ENST00000609898 542 ntBASIC17.28■□□□□ 0.36
SLC28A2O43868 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC28A2O43868 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 GPAT2P1-201ENST00000444924 1672 ntBASIC17.28■□□□□ 0.36
SLC28A2O43868 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC28A2O43868 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC28A2O43868 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC28A2O43868 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC28A2O43868 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 MIR564-202ENST00000385049 94 ntBASIC17.27■□□□□ 0.36
SLC28A2O43868 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC28A2O43868 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC28A2O43868 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 AC104819.1-201ENST00000504587 486 ntBASIC17.27■□□□□ 0.36
SLC28A2O43868 POLD2P1-201ENST00000511220 997 ntBASIC17.27■□□□□ 0.36
SLC28A2O43868 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC28A2O43868 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.27■□□□□ 0.36
SLC28A2O43868 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC28A2O43868 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC28A2O43868 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC28A2O43868 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLC28A2O43868 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLC28A2O43868 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A2O43868 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC28A2O43868 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
SLC28A2O43868 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A2O43868 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC28A2O43868 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A2O43868 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A2O43868 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SLC28A2O43868 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A2O43868 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A2O43868 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.35
SLC28A2O43868 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SLC28A2O43868 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A2O43868 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A2O43868 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC28A2O43868 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SLC28A2O43868 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A2O43868 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.26■□□□□ 0.35
SLC28A2O43868 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SLC28A2O43868 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A2O43868 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A2O43868 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SLC28A2O43868 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A2O43868 NOC2LP2-201ENST00000407594 1944 ntBASIC17.26■□□□□ 0.35
SLC28A2O43868 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms