Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 KRT8P45-201ENST00000414328 1447 ntBASIC16.64■□□□□ 0.25
ARHGEF9O43307 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 HMGA1P5-201ENST00000412453 271 ntBASIC16.64■□□□□ 0.25
ARHGEF9O43307 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 AL109659.2-201ENST00000606809 1674 ntBASIC16.64■□□□□ 0.25
ARHGEF9O43307 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ARHGEF9O43307 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARHGEF9O43307 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 AC092647.4-201ENST00000457211 535 ntBASIC16.63■□□□□ 0.25
ARHGEF9O43307 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARHGEF9O43307 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ARHGEF9O43307 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ARHGEF9O43307 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF9O43307 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms