Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ID1-201ENST00000376105 1233 ntBASIC18.64■□□□□ 0.57
CCDC188H7C350 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC188H7C350 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC188H7C350 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC188H7C350 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC188H7C350 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC188H7C350 AL359736.2-201ENST00000621992 437 ntBASIC18.64■□□□□ 0.57
CCDC188H7C350 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC188H7C350 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC188H7C350 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC188H7C350 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC188H7C350 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC188H7C350 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC188H7C350 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC188H7C350 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC188H7C350 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC188H7C350 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC188H7C350 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC188H7C350 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC188H7C350 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC188H7C350 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC188H7C350 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC188H7C350 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC188H7C350 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.62■□□□□ 0.57
CCDC188H7C350 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC188H7C350 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC188H7C350 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC188H7C350 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC188H7C350 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC188H7C350 AC092666.2-201ENST00000613287 246 ntBASIC18.62■□□□□ 0.57
CCDC188H7C350 REXO1L10P-201ENST00000615707 1290 ntBASIC18.62■□□□□ 0.57
CCDC188H7C350 REXO1L12P-201ENST00000622156 912 ntBASIC18.62■□□□□ 0.57
CCDC188H7C350 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 LINC00167-201ENST00000530583 1419 ntBASIC18.62■□□□□ 0.57
CCDC188H7C350 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC188H7C350 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC188H7C350 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC188H7C350 REXO1L11P-201ENST00000620964 1927 ntBASIC18.62■□□□□ 0.57
CCDC188H7C350 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC188H7C350 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC188H7C350 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC188H7C350 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC188H7C350 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC188H7C350 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC188H7C350 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC188H7C350 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC188H7C350 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC188H7C350 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC188H7C350 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC188H7C350 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC188H7C350 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC188H7C350 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC188H7C350 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC188H7C350 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC188H7C350 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC188H7C350 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CCDC188H7C350 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC188H7C350 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC188H7C350 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC188H7C350 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms