Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 AC110285.5-201ENST00000611501 352 ntBASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 CR392000.1-201ENST00000624770 1228 ntBASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 AC026271.3-201ENST00000571884 352 ntBASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 AC124016.1-201ENST00000609552 612 ntBASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 AC018695.7-201ENST00000624587 2492 ntBASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV18A0A075B6X5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 AC011506.1-201ENST00000474329 610 ntBASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV18A0A075B6X5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 AC036111.1-201ENST00000533973 1582 ntBASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 UBALD1-205ENST00000590891 2641 ntBASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms