Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 GUSBP12-201ENST00000513727 720 ntBASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 AC104692.2-201ENST00000603054 253 ntBASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 ESPNP-201ENST00000270691 2015 ntBASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA6Q9Y5G7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 RN7SL606P-201ENST00000472779 293 ntBASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 AL160237.2-201ENST00000556165 472 ntBASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 AC074051.2-201ENST00000565115 352 ntBASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 AL031008.1-201ENST00000619963 541 ntBASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA6Q9Y5G7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA6Q9Y5G7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms