Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 AL031432.2-201ENST00000566714 459 ntBASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 AL928711.1-201ENST00000570165 459 ntBASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.49■■□□□ 1.19
RTCBQ9Y3I0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 ANO7L1-203ENST00000602586 1720 ntBASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 AL049757.1-201ENST00000616842 1596 ntBASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 IGLL3P-201ENST00000412472 434 ntBASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 CD63-210ENST00000550776 870 ntTSL 5 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 AC027612.4-201ENST00000605371 583 ntBASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTCBQ9Y3I0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 PDPK2P-202ENST00000562415 1191 ntBASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 AC011467.4-201ENST00000594891 528 ntBASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 AC010654.1-201ENST00000615722 808 ntBASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
RTCBQ9Y3I0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 SIGLEC30P-201ENST00000455569 941 ntBASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 AC004877.2-201ENST00000623941 599 ntBASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTCBQ9Y3I0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms