Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.52■□□□□ 0.07
TREM2Q9NZC2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TREM2Q9NZC2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
TREM2Q9NZC2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TREM2Q9NZC2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TREM2Q9NZC2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TREM2Q9NZC2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.52■□□□□ 0.07
TREM2Q9NZC2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.52■□□□□ 0.07
TREM2Q9NZC2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TREM2Q9NZC2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 SLC25A6P5-201ENST00000435663 894 ntBASIC15.51■□□□□ 0.07
TREM2Q9NZC2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TREM2Q9NZC2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 AC093677.2-201ENST00000600169 1863 ntBASIC15.5■□□□□ 0.07
TREM2Q9NZC2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 HLA-F-220ENST00000434407 884 ntBASIC15.5■□□□□ 0.07
TREM2Q9NZC2 PVRIG2P-201ENST00000435460 978 ntBASIC15.5■□□□□ 0.07
TREM2Q9NZC2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.5■□□□□ 0.07
TREM2Q9NZC2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 AC009102.3-201ENST00000623118 1491 ntBASIC15.5■□□□□ 0.07
TREM2Q9NZC2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TREM2Q9NZC2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms