Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 AL031133.1-201ENST00000406807 723 ntBASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 FAM8A6P-201ENST00000407496 1135 ntBASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 AL353719.1-201ENST00000566847 864 ntBASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 AC091076.1-201ENST00000610741 619 ntBASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 AC011558.1-201ENST00000623459 338 ntBASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXP3Q9BZS1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXP3Q9BZS1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
FOXP3Q9BZS1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXP3Q9BZS1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXP3Q9BZS1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 AC133963.1-201ENST00000504166 1679 ntBASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXP3Q9BZS1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 AL024508.2-201ENST00000607749 1894 ntBASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 MIR4674-201ENST00000582457 87 ntBASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FOXP3Q9BZS1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.49■□□□□ 0.55
FOXP3Q9BZS1 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms