Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
SHC3Q92529 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SHC3Q92529 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC3Q92529 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC3Q92529 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SHC3Q92529 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC3Q92529 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC3Q92529 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC3Q92529 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.12■□□□□ 0.65
SHC3Q92529 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 LINC00304-203ENST00000565008 1864 ntBASIC19.12■□□□□ 0.65
SHC3Q92529 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.12■□□□□ 0.65
SHC3Q92529 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
SHC3Q92529 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SHC3Q92529 AL031133.1-201ENST00000406807 723 ntBASIC19.12■□□□□ 0.65
SHC3Q92529 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC3Q92529 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SHC3Q92529 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.12■□□□□ 0.65
SHC3Q92529 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.12■□□□□ 0.65
SHC3Q92529 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SHC3Q92529 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.12■□□□□ 0.65
SHC3Q92529 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
SHC3Q92529 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC3Q92529 REXO1L11P-201ENST00000620964 1927 ntBASIC19.12■□□□□ 0.65
SHC3Q92529 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.11■□□□□ 0.65
SHC3Q92529 AC133963.1-201ENST00000504166 1679 ntBASIC19.11■□□□□ 0.65
SHC3Q92529 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.11■□□□□ 0.65
SHC3Q92529 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.11■□□□□ 0.65
SHC3Q92529 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.11■□□□□ 0.65
SHC3Q92529 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.11■□□□□ 0.65
SHC3Q92529 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.11■□□□□ 0.65
SHC3Q92529 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SHC3Q92529 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.11■□□□□ 0.65
SHC3Q92529 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SHC3Q92529 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC3Q92529 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SHC3Q92529 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SHC3Q92529 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.1■□□□□ 0.65
SHC3Q92529 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SHC3Q92529 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.1■□□□□ 0.65
SHC3Q92529 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SHC3Q92529 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SHC3Q92529 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SHC3Q92529 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.1■□□□□ 0.65
SHC3Q92529 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SHC3Q92529 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.1■□□□□ 0.65
SHC3Q92529 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.1■□□□□ 0.65
SHC3Q92529 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
SHC3Q92529 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.1■□□□□ 0.65
SHC3Q92529 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SHC3Q92529 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.1■□□□□ 0.65
SHC3Q92529 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHC3Q92529 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms