Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 TERF1P1-201ENST00000311003 1181 ntBASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 AP000523.1-201ENST00000398242 1049 ntBASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 AC010203.1-204ENST00000548782 407 ntBASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCHCR1Q8TD31 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCHCR1Q8TD31 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCHCR1Q8TD31 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 AC141257.4-201ENST00000634557 245 ntBASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 AC136944.6-201ENST00000634818 245 ntBASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 AC092865.7-201ENST00000641832 219 ntBASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCHCR1Q8TD31 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 BX664615.1-201ENST00000443558 458 ntBASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms