Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 KRT18P55-202ENST00000578578 1546 ntBASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 RCN1P1-201ENST00000400413 996 ntBASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 HLA-F-220ENST00000434407 884 ntBASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 DUTP2-201ENST00000519164 463 ntBASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 RN7SL850P-201ENST00000579959 291 ntBASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE9Q8IYJ1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.77■□□□□ 0.43
CPNE9Q8IYJ1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
CPNE9Q8IYJ1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE9Q8IYJ1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE9Q8IYJ1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE9Q8IYJ1 AC100803.2-201ENST00000562459 1963 ntBASIC17.77■□□□□ 0.43
CPNE9Q8IYJ1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 HOMER2P1-201ENST00000455653 964 ntBASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE9Q8IYJ1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 FAM8A6P-201ENST00000407496 1135 ntBASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 AC092647.4-201ENST00000457211 535 ntBASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 AC113404.2-201ENST00000507884 177 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms