Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.14■□□□□ 0.66
NPAS4Q8IUM7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NPAS4Q8IUM7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 RPS8P6-201ENST00000426177 609 ntBASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 AL353593.2-201ENST00000602529 1483 ntBASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS4Q8IUM7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 AC004706.3-202ENST00000621574 984 ntBASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 AC134684.3-201ENST00000641758 218 ntBASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 AC073592.3-201ENST00000625118 1834 ntBASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS4Q8IUM7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 PMS2P2-201ENST00000425039 1128 ntBASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS4Q8IUM7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 SIRPAP1-201ENST00000448467 1770 ntBASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 ELK2BP-201ENST00000415014 1224 ntBASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms