Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 AL138781.2-201ENST00000617896 1843 ntBASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
OTOP1Q7RTM1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.67■□□□□ 0.9
OTOP1Q7RTM1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 MTCL1P1-201ENST00000446207 792 ntBASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 AC120498.9-201ENST00000339021 3867 ntBASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 WIZP1-201ENST00000531444 2299 ntBASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OTOP1Q7RTM1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 AC073592.3-201ENST00000625118 1834 ntBASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 AC002310.6-201ENST00000624451 1377 ntBASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms