Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 REXO1L9P-201ENST00000604264 2108 ntBASIC22.57■■□□□ 1.2
COPS6Q7L5N1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COPS6Q7L5N1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 RPS2P28-201ENST00000314255 741 ntBASIC22.56■■□□□ 1.2
COPS6Q7L5N1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 RPL13AP23-201ENST00000480739 586 ntBASIC22.56■■□□□ 1.2
COPS6Q7L5N1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 MTDHP4-201ENST00000600287 670 ntBASIC22.56■■□□□ 1.2
COPS6Q7L5N1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COPS6Q7L5N1 AC104581.1-202ENST00000635932 2618 ntBASIC22.56■■□□□ 1.2
COPS6Q7L5N1 SIRPAP1-201ENST00000448467 1770 ntBASIC22.55■■□□□ 1.2
COPS6Q7L5N1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 AC004817.3-201ENST00000602957 2129 ntBASIC22.55■■□□□ 1.2
COPS6Q7L5N1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 BX005266.1-201ENST00000473402 457 ntBASIC22.55■■□□□ 1.2
COPS6Q7L5N1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 OR7E14P-202ENST00000530490 1290 ntBASIC22.55■■□□□ 1.2
COPS6Q7L5N1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 AC106730.1-201ENST00000566722 1090 ntBASIC22.55■■□□□ 1.2
COPS6Q7L5N1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 AC079776.2-201ENST00000641154 1609 ntBASIC22.55■■□□□ 1.2
COPS6Q7L5N1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.55■■□□□ 1.2
COPS6Q7L5N1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.54■■□□□ 1.2
COPS6Q7L5N1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC22.53■■□□□ 1.2
COPS6Q7L5N1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms