Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASC4Q6P4E1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CASC4Q6P4E1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASC4Q6P4E1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 HMGA1P5-201ENST00000412453 271 ntBASIC18.33■□□□□ 0.52
CASC4Q6P4E1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 FAM87A-204ENST00000613235 858 ntBASIC18.33■□□□□ 0.52
CASC4Q6P4E1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 AC092865.7-201ENST00000641832 219 ntBASIC18.33■□□□□ 0.52
CASC4Q6P4E1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 AC106820.2-201ENST00000563775 3264 ntBASIC18.33■□□□□ 0.52
CASC4Q6P4E1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CASC4Q6P4E1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 KRT18P55-202ENST00000578578 1546 ntBASIC18.32■□□□□ 0.52
CASC4Q6P4E1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASC4Q6P4E1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASC4Q6P4E1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms