Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 AC100803.2-201ENST00000562459 1963 ntBASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SWSAP1Q6NVH7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 FAM220CP-201ENST00000395253 831 ntBASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 MRPL3P1-201ENST00000400109 1033 ntBASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 AC008608.2-201ENST00000606089 416 ntBASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 TP73-AS1-207ENST00000624167 988 ntBASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SWSAP1Q6NVH7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 MTDHP3-201ENST00000594186 672 ntBASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SWSAP1Q6NVH7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms