Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
COL10A1Q03692 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COL10A1Q03692 RCN1P1-201ENST00000400413 996 ntBASIC15.16■□□□□ 0.02
COL10A1Q03692 FAM8A6P-201ENST00000407496 1135 ntBASIC15.16■□□□□ 0.02
COL10A1Q03692 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.16■□□□□ 0.02
COL10A1Q03692 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
COL10A1Q03692 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 AC104076.2-201ENST00000448912 469 ntBASIC15.16■□□□□ 0.02
COL10A1Q03692 AC092597.1-201ENST00000487352 616 ntBASIC15.16■□□□□ 0.02
COL10A1Q03692 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.16■□□□□ 0.02
COL10A1Q03692 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.16■□□□□ 0.02
COL10A1Q03692 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.16■□□□□ 0.02
COL10A1Q03692 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.16■□□□□ 0.02
COL10A1Q03692 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
COL10A1Q03692 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.16■□□□□ 0.02
COL10A1Q03692 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.16■□□□□ 0.02
COL10A1Q03692 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
COL10A1Q03692 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
COL10A1Q03692 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.16■□□□□ 0.02
COL10A1Q03692 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.16■□□□□ 0.02
COL10A1Q03692 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
COL10A1Q03692 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COL10A1Q03692 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.16■□□□□ 0.02
COL10A1Q03692 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL10A1Q03692 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.16■□□□□ 0.02
COL10A1Q03692 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
COL10A1Q03692 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
COL10A1Q03692 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
COL10A1Q03692 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
COL10A1Q03692 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
COL10A1Q03692 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.15■□□□□ 0.02
COL10A1Q03692 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.15■□□□□ 0.02
COL10A1Q03692 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.15■□□□□ 0.02
COL10A1Q03692 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.15■□□□□ 0.02
COL10A1Q03692 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.15■□□□□ 0.02
COL10A1Q03692 KRT18P38-201ENST00000449496 1282 ntBASIC15.15■□□□□ 0.02
COL10A1Q03692 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.15■□□□□ 0.02
COL10A1Q03692 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
COL10A1Q03692 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.15■□□□□ 0.02
COL10A1Q03692 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.15■□□□□ 0.02
COL10A1Q03692 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.15■□□□□ 0.02
COL10A1Q03692 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.15■□□□□ 0.02
COL10A1Q03692 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.15■□□□□ 0.02
COL10A1Q03692 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 AC132938.6-201ENST00000623828 1655 ntBASIC15.15■□□□□ 0.02
COL10A1Q03692 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL10A1Q03692 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.15■□□□□ 0.02
COL10A1Q03692 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
COL10A1Q03692 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.14■□□□□ 0.01
COL10A1Q03692 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
COL10A1Q03692 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.14■□□□□ 0.01
COL10A1Q03692 LINC00602-201ENST00000629776 2065 ntBASIC15.14■□□□□ 0.01
COL10A1Q03692 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
COL10A1Q03692 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 TMPOP1-202ENST00000424642 1267 ntBASIC15.14■□□□□ 0.01
COL10A1Q03692 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 HLA-F-220ENST00000434407 884 ntBASIC15.14■□□□□ 0.01
COL10A1Q03692 AC112907.2-201ENST00000448639 330 ntBASIC15.14■□□□□ 0.01
COL10A1Q03692 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.14■□□□□ 0.01
COL10A1Q03692 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms