Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CBX1P83916 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CBX1P83916 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.78■□□□□ 0.6
CBX1P83916 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.78■□□□□ 0.6
CBX1P83916 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CBX1P83916 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.78■□□□□ 0.6
CBX1P83916 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CBX1P83916 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CBX1P83916 AL035685.1-201ENST00000636663 812 ntBASIC18.78■□□□□ 0.6
CBX1P83916 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CBX1P83916 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CBX1P83916 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CBX1P83916 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.78■□□□□ 0.6
CBX1P83916 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CBX1P83916 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
CBX1P83916 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 TFP1-202ENST00000475455 1573 ntBASIC18.77■□□□□ 0.6
CBX1P83916 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 AC126177.1-201ENST00000547829 2218 ntBASIC18.77■□□□□ 0.6
CBX1P83916 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.77■□□□□ 0.6
CBX1P83916 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CBX1P83916 AC010141.2-201ENST00000452426 721 ntBASIC18.77■□□□□ 0.6
CBX1P83916 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.77■□□□□ 0.6
CBX1P83916 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.77■□□□□ 0.6
CBX1P83916 KRT18P55-202ENST00000578578 1546 ntBASIC18.77■□□□□ 0.6
CBX1P83916 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CBX1P83916 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX1P83916 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBX1P83916 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBX1P83916 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBX1P83916 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBX1P83916 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CBX1P83916 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBX1P83916 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC18.77■□□□□ 0.59
CBX1P83916 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBX1P83916 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CBX1P83916 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.77■□□□□ 0.59
CBX1P83916 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CBX1P83916 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBX1P83916 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.77■□□□□ 0.59
CBX1P83916 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CBX1P83916 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CBX1P83916 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CBX1P83916 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX1P83916 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBX1P83916 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX1P83916 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX1P83916 CICP4-201ENST00000447359 2812 ntBASIC18.76■□□□□ 0.59
CBX1P83916 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBX1P83916 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX1P83916 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX1P83916 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CBX1P83916 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CBX1P83916 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX1P83916 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX1P83916 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX1P83916 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.76■□□□□ 0.59
CBX1P83916 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX1P83916 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX1P83916 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.76■□□□□ 0.59
CBX1P83916 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CBX1P83916 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CBX1P83916 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBX1P83916 AC133963.1-201ENST00000504166 1679 ntBASIC18.76■□□□□ 0.59
CBX1P83916 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBX1P83916 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CBX1P83916 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CBX1P83916 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CBX1P83916 PHGDH-209ENST00000641074 1780 ntBASIC18.76■□□□□ 0.59
CBX1P83916 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.75■□□□□ 0.59
CBX1P83916 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.75■□□□□ 0.59
CBX1P83916 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBX1P83916 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBX1P83916 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.75■□□□□ 0.59
CBX1P83916 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms