Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNRPEP62304 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SNRPEP62304 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.77□□□□□ -0.21
SNRPEP62304 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SNRPEP62304 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SNRPEP62304 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.76□□□□□ -0.21
SNRPEP62304 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.76□□□□□ -0.21
SNRPEP62304 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
SNRPEP62304 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
SNRPEP62304 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.76□□□□□ -0.21
SNRPEP62304 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 AC104417.2-201ENST00000562989 1793 ntBASIC13.76□□□□□ -0.21
SNRPEP62304 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SNRPEP62304 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.76□□□□□ -0.21
SNRPEP62304 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.76□□□□□ -0.21
SNRPEP62304 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
SNRPEP62304 AC092171.3-201ENST00000610122 2651 ntBASIC13.76□□□□□ -0.21
SNRPEP62304 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC13.76□□□□□ -0.21
SNRPEP62304 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 SMUG1P1-201ENST00000590640 811 ntBASIC13.76□□□□□ -0.21
SNRPEP62304 AC053503.5-201ENST00000601508 636 ntBASIC13.76□□□□□ -0.21
SNRPEP62304 AL031963.3-201ENST00000606441 850 ntBASIC13.76□□□□□ -0.21
SNRPEP62304 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 AL137784.3-201ENST00000623858 2288 ntBASIC13.76□□□□□ -0.21
SNRPEP62304 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.76□□□□□ -0.21
SNRPEP62304 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.76□□□□□ -0.21
SNRPEP62304 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
SNRPEP62304 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 AC005915.1-201ENST00000624912 2018 ntBASIC13.76□□□□□ -0.21
SNRPEP62304 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SNRPEP62304 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNRPEP62304 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 AC006058.4-201ENST00000624016 1670 ntBASIC13.75□□□□□ -0.21
SNRPEP62304 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SNRPEP62304 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.75□□□□□ -0.21
SNRPEP62304 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
SNRPEP62304 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.75□□□□□ -0.21
SNRPEP62304 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.75□□□□□ -0.21
SNRPEP62304 AC015656.1-201ENST00000624209 3578 ntBASIC13.75□□□□□ -0.21
SNRPEP62304 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SNRPEP62304 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.75□□□□□ -0.21
SNRPEP62304 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC13.75□□□□□ -0.21
SNRPEP62304 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.75□□□□□ -0.21
SNRPEP62304 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SNRPEP62304 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.75□□□□□ -0.21
SNRPEP62304 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SNRPEP62304 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNRPEP62304 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SNRPEP62304 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SNRPEP62304 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SNRPEP62304 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SNRPEP62304 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 KRT8P20-201ENST00000423953 1409 ntBASIC13.74□□□□□ -0.21
SNRPEP62304 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SNRPEP62304 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
SNRPEP62304 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
SNRPEP62304 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SNRPEP62304 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNRPEP62304 EEF1DP3-203ENST00000566025 782 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms