Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.64■□□□□ 0.74
CDR1P51861 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.64■□□□□ 0.73
CDR1P51861 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
CDR1P51861 AC012313.1-201ENST00000593393 3059 ntBASIC19.64■□□□□ 0.73
CDR1P51861 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.64■□□□□ 0.73
CDR1P51861 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.64■□□□□ 0.73
CDR1P51861 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.64■□□□□ 0.73
CDR1P51861 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.64■□□□□ 0.73
CDR1P51861 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDR1P51861 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 KRT8P50-201ENST00000562022 1438 ntBASIC19.64■□□□□ 0.73
CDR1P51861 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CDR1P51861 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.64■□□□□ 0.73
CDR1P51861 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CDR1P51861 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDR1P51861 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CDR1P51861 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 AL162741.1-201ENST00000565563 1558 ntBASIC19.63■□□□□ 0.73
CDR1P51861 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.63■□□□□ 0.73
CDR1P51861 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.63■□□□□ 0.73
CDR1P51861 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.63■□□□□ 0.73
CDR1P51861 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.63■□□□□ 0.73
CDR1P51861 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 HCG4P8-203ENST00000443049 980 ntBASIC19.63■□□□□ 0.73
CDR1P51861 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDR1P51861 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.63■□□□□ 0.73
CDR1P51861 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.63■□□□□ 0.73
CDR1P51861 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CDR1P51861 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.63■□□□□ 0.73
CDR1P51861 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.63■□□□□ 0.73
CDR1P51861 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR1P51861 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.62■□□□□ 0.73
CDR1P51861 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.62■□□□□ 0.73
CDR1P51861 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.62■□□□□ 0.73
CDR1P51861 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.62■□□□□ 0.73
CDR1P51861 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDR1P51861 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.62■□□□□ 0.73
CDR1P51861 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDR1P51861 AC068880.1-201ENST00000507289 2297 ntBASIC19.62■□□□□ 0.73
CDR1P51861 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDR1P51861 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDR1P51861 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.62■□□□□ 0.73
CDR1P51861 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.62■□□□□ 0.73
CDR1P51861 AC069148.1-201ENST00000608741 768 ntBASIC19.62■□□□□ 0.73
CDR1P51861 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.62■□□□□ 0.73
CDR1P51861 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.62■□□□□ 0.73
CDR1P51861 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CDR1P51861 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.62■□□□□ 0.73
CDR1P51861 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.62■□□□□ 0.73
CDR1P51861 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.62■□□□□ 0.73
CDR1P51861 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.62■□□□□ 0.73
CDR1P51861 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR1P51861 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms