Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.2■□□□□ 0.34
HTR1EP28566 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.2■□□□□ 0.34
HTR1EP28566 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.2■□□□□ 0.34
HTR1EP28566 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
HTR1EP28566 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HTR1EP28566 AL023284.2-201ENST00000405850 579 ntBASIC17.2■□□□□ 0.34
HTR1EP28566 AC026396.1-201ENST00000419388 421 ntBASIC17.2■□□□□ 0.34
HTR1EP28566 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.2■□□□□ 0.34
HTR1EP28566 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.2■□□□□ 0.34
HTR1EP28566 AC008040.2-201ENST00000461049 708 ntBASIC17.2■□□□□ 0.34
HTR1EP28566 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.2■□□□□ 0.34
HTR1EP28566 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.2■□□□□ 0.34
HTR1EP28566 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.2■□□□□ 0.34
HTR1EP28566 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.2■□□□□ 0.34
HTR1EP28566 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.2■□□□□ 0.34
HTR1EP28566 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.2■□□□□ 0.34
HTR1EP28566 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.2■□□□□ 0.34
HTR1EP28566 AL121956.5-201ENST00000625261 221 ntBASIC17.2■□□□□ 0.34
HTR1EP28566 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
HTR1EP28566 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.2■□□□□ 0.34
HTR1EP28566 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.2■□□□□ 0.34
HTR1EP28566 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTR1EP28566 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.2■□□□□ 0.34
HTR1EP28566 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HTR1EP28566 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.19■□□□□ 0.34
HTR1EP28566 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HTR1EP28566 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 IER3-202ENST00000376377 1350 ntBASIC17.19■□□□□ 0.34
HTR1EP28566 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HTR1EP28566 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.19■□□□□ 0.34
HTR1EP28566 SLC25A1P2-201ENST00000430693 912 ntBASIC17.19■□□□□ 0.34
HTR1EP28566 MFAP1P1-201ENST00000442257 1255 ntBASIC17.19■□□□□ 0.34
HTR1EP28566 MCCD1P1-208ENST00000445732 328 ntBASIC17.19■□□□□ 0.34
HTR1EP28566 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.19■□□□□ 0.34
HTR1EP28566 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.19■□□□□ 0.34
HTR1EP28566 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.19■□□□□ 0.34
HTR1EP28566 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
HTR1EP28566 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.19■□□□□ 0.34
HTR1EP28566 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
HTR1EP28566 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.19■□□□□ 0.34
HTR1EP28566 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
HTR1EP28566 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.19■□□□□ 0.34
HTR1EP28566 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HTR1EP28566 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HTR1EP28566 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.19■□□□□ 0.34
HTR1EP28566 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.19■□□□□ 0.34
HTR1EP28566 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HTR1EP28566 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.19■□□□□ 0.34
HTR1EP28566 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTR1EP28566 AC009102.3-201ENST00000623118 1491 ntBASIC17.18■□□□□ 0.34
HTR1EP28566 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.18■□□□□ 0.34
HTR1EP28566 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HTR1EP28566 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.18■□□□□ 0.34
HTR1EP28566 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HTR1EP28566 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTR1EP28566 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTR1EP28566 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HTR1EP28566 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.18■□□□□ 0.34
HTR1EP28566 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTR1EP28566 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTR1EP28566 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.18■□□□□ 0.34
HTR1EP28566 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.18■□□□□ 0.34
HTR1EP28566 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HTR1EP28566 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTR1EP28566 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTR1EP28566 AL163051.1-201ENST00000569214 1512 ntBASIC17.18■□□□□ 0.34
HTR1EP28566 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.18■□□□□ 0.34
HTR1EP28566 MIR149-201ENST00000384879 89 ntBASIC17.18■□□□□ 0.34
HTR1EP28566 AL450487.1-201ENST00000426799 995 ntBASIC17.18■□□□□ 0.34
HTR1EP28566 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HTR1EP28566 FAM86EP-206ENST00000510506 987 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms