Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.89■□□□□ 0.29
SNX4O95219 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.89■□□□□ 0.29
SNX4O95219 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 HYMAI.1-201ENST00000620949 238 ntBASIC16.89■□□□□ 0.29
SNX4O95219 AL157888.1-201ENST00000631930 593 ntBASIC16.89■□□□□ 0.29
SNX4O95219 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX4O95219 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.89■□□□□ 0.29
SNX4O95219 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SNX4O95219 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX4O95219 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX4O95219 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX4O95219 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SNX4O95219 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SNX4O95219 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SNX4O95219 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SNX4O95219 GNAS-203ENST00000306120 1878 ntBASIC16.88■□□□□ 0.29
SNX4O95219 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 KRT8P50-201ENST00000562022 1438 ntBASIC16.88■□□□□ 0.29
SNX4O95219 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SNX4O95219 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SNX4O95219 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SNX4O95219 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX4O95219 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX4O95219 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX4O95219 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX4O95219 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SNX4O95219 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.88■□□□□ 0.29
SNX4O95219 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.88■□□□□ 0.29
SNX4O95219 AC091076.1-201ENST00000610741 619 ntBASIC16.88■□□□□ 0.29
SNX4O95219 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX4O95219 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.88■□□□□ 0.29
SNX4O95219 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.88■□□□□ 0.29
SNX4O95219 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX4O95219 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX4O95219 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX4O95219 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.88■□□□□ 0.29
SNX4O95219 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX4O95219 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNX4O95219 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX4O95219 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX4O95219 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX4O95219 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SNX4O95219 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SNX4O95219 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX4O95219 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX4O95219 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX4O95219 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SNX4O95219 HBZP1-201ENST00000354915 429 ntBASIC16.87■□□□□ 0.29
SNX4O95219 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX4O95219 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX4O95219 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.87■□□□□ 0.29
SNX4O95219 AL136038.3-201ENST00000561909 1096 ntBASIC16.87■□□□□ 0.29
SNX4O95219 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
SNX4O95219 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SNX4O95219 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX4O95219 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX4O95219 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms