Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AL162741.1-201ENST00000565563 1558 ntBASIC19.89■□□□□ 0.77
CLSTN1O94985 AL049597.2-201ENST00000565575 961 ntBASIC19.89■□□□□ 0.77
CLSTN1O94985 HOXB1-202ENST00000577092 1414 ntBASIC19.89■□□□□ 0.77
CLSTN1O94985 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.89■□□□□ 0.77
CLSTN1O94985 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.89■□□□□ 0.77
CLSTN1O94985 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.89■□□□□ 0.77
CLSTN1O94985 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLSTN1O94985 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CLSTN1O94985 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.88■□□□□ 0.77
CLSTN1O94985 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.88■□□□□ 0.77
CLSTN1O94985 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CLSTN1O94985 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.88■□□□□ 0.77
CLSTN1O94985 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.88■□□□□ 0.77
CLSTN1O94985 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLSTN1O94985 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CLSTN1O94985 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLSTN1O94985 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.88■□□□□ 0.77
CLSTN1O94985 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 AC073508.3-201ENST00000619697 1419 ntBASIC19.88■□□□□ 0.77
CLSTN1O94985 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.88■□□□□ 0.77
CLSTN1O94985 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CLSTN1O94985 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CLSTN1O94985 RNF152P1-201ENST00000397754 604 ntBASIC19.88■□□□□ 0.77
CLSTN1O94985 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLSTN1O94985 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.88■□□□□ 0.77
CLSTN1O94985 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CLSTN1O94985 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.88■□□□□ 0.77
CLSTN1O94985 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.88■□□□□ 0.77
CLSTN1O94985 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.88■□□□□ 0.77
CLSTN1O94985 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.88■□□□□ 0.77
CLSTN1O94985 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLSTN1O94985 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLSTN1O94985 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLSTN1O94985 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLSTN1O94985 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CLSTN1O94985 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CLSTN1O94985 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 LTB4R2-202ENST00000528054 3092 ntBASIC19.87■□□□□ 0.77
CLSTN1O94985 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLSTN1O94985 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLSTN1O94985 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLSTN1O94985 FZD10-202ENST00000539839 3282 ntBASIC19.87■□□□□ 0.77
CLSTN1O94985 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLSTN1O94985 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CLSTN1O94985 SEC1P-202ENST00000473944 940 ntBASIC19.87■□□□□ 0.77
CLSTN1O94985 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.87■□□□□ 0.77
CLSTN1O94985 LINC01238-205ENST00000567549 1107 ntBASIC19.87■□□□□ 0.77
CLSTN1O94985 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CLSTN1O94985 AL157888.1-201ENST00000631930 593 ntBASIC19.87■□□□□ 0.77
CLSTN1O94985 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.87■□□□□ 0.77
CLSTN1O94985 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CLSTN1O94985 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLSTN1O94985 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLSTN1O94985 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLSTN1O94985 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLSTN1O94985 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CLSTN1O94985 AC018470.1-201ENST00000624790 3129 ntBASIC19.86■□□□□ 0.77
CLSTN1O94985 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms