Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CLPXO76031 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CLPXO76031 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLPXO76031 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.32■□□□□ 0.2
CLPXO76031 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLPXO76031 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLPXO76031 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLPXO76031 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.32■□□□□ 0.2
CLPXO76031 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.32■□□□□ 0.2
CLPXO76031 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.32■□□□□ 0.2
CLPXO76031 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.32■□□□□ 0.2
CLPXO76031 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.32■□□□□ 0.2
CLPXO76031 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.32■□□□□ 0.2
CLPXO76031 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLPXO76031 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.32■□□□□ 0.2
CLPXO76031 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.32■□□□□ 0.2
CLPXO76031 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.32■□□□□ 0.2
CLPXO76031 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 AC092850.2-201ENST00000623821 2697 ntBASIC16.32■□□□□ 0.2
CLPXO76031 AC068587.9-201ENST00000641814 219 ntBASIC16.32■□□□□ 0.2
CLPXO76031 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLPXO76031 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CLPXO76031 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLPXO76031 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLPXO76031 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CLPXO76031 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.31■□□□□ 0.2
CLPXO76031 AC073648.6-201ENST00000641589 218 ntBASIC16.31■□□□□ 0.2
CLPXO76031 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.31■□□□□ 0.2
CLPXO76031 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLPXO76031 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.31■□□□□ 0.2
CLPXO76031 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPXO76031 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.31■□□□□ 0.2
CLPXO76031 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLPXO76031 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPXO76031 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.3■□□□□ 0.2
CLPXO76031 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLPXO76031 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPXO76031 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPXO76031 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLPXO76031 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPXO76031 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPXO76031 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPXO76031 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLPXO76031 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLPXO76031 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLPXO76031 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPXO76031 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
CLPXO76031 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPXO76031 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
CLPXO76031 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLPXO76031 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLPXO76031 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms