Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN11O75508 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CLDN11O75508 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CLDN11O75508 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CLDN11O75508 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.3■□□□□ 0.52
CLDN11O75508 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN11O75508 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN11O75508 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.3■□□□□ 0.52
CLDN11O75508 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN11O75508 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN11O75508 AC111152.3-201ENST00000569699 673 ntBASIC18.3■□□□□ 0.52
CLDN11O75508 MIR5100-201ENST00000579544 119 ntBASIC18.3■□□□□ 0.52
CLDN11O75508 AL732292.2-201ENST00000609649 430 ntBASIC18.3■□□□□ 0.52
CLDN11O75508 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLDN11O75508 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.3■□□□□ 0.52
CLDN11O75508 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN11O75508 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN11O75508 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN11O75508 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLDN11O75508 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLDN11O75508 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CLDN11O75508 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 AC100803.2-201ENST00000562459 1963 ntBASIC18.3■□□□□ 0.52
CLDN11O75508 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN11O75508 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLDN11O75508 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN11O75508 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN11O75508 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN11O75508 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN11O75508 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN11O75508 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN11O75508 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN11O75508 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 RCN1P2-201ENST00000398357 915 ntBASIC18.29■□□□□ 0.52
CLDN11O75508 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN11O75508 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN11O75508 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN11O75508 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN11O75508 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLDN11O75508 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLDN11O75508 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN11O75508 AL691432.3-201ENST00000621860 400 ntBASIC18.29■□□□□ 0.52
CLDN11O75508 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.29■□□□□ 0.52
CLDN11O75508 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN11O75508 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN11O75508 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN11O75508 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN11O75508 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLDN11O75508 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CLDN11O75508 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN11O75508 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.28■□□□□ 0.52
CLDN11O75508 AC007967.3-201ENST00000434308 558 ntBASIC18.28■□□□□ 0.52
CLDN11O75508 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.28■□□□□ 0.52
CLDN11O75508 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.28■□□□□ 0.52
CLDN11O75508 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.28■□□□□ 0.52
CLDN11O75508 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.28■□□□□ 0.52
CLDN11O75508 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms