Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PHGDHO43175 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PHGDHO43175 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.87■□□□□ 0.45
PHGDHO43175 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PHGDHO43175 AC108860.2-201ENST00000562760 2183 ntBASIC17.87■□□□□ 0.45
PHGDHO43175 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PHGDHO43175 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.87■□□□□ 0.45
PHGDHO43175 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PHGDHO43175 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.87■□□□□ 0.45
PHGDHO43175 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PHGDHO43175 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PHGDHO43175 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.87■□□□□ 0.45
PHGDHO43175 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.87■□□□□ 0.45
PHGDHO43175 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PHGDHO43175 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
PHGDHO43175 AL596275.1-201ENST00000423464 877 ntBASIC17.87■□□□□ 0.45
PHGDHO43175 ECEL1P3-201ENST00000427961 737 ntBASIC17.87■□□□□ 0.45
PHGDHO43175 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.87■□□□□ 0.45
PHGDHO43175 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
PHGDHO43175 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PHGDHO43175 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.87■□□□□ 0.45
PHGDHO43175 AL512604.3-201ENST00000569583 964 ntBASIC17.87■□□□□ 0.45
PHGDHO43175 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.87■□□□□ 0.45
PHGDHO43175 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
PHGDHO43175 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
PHGDHO43175 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PHGDHO43175 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PHGDHO43175 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PHGDHO43175 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PHGDHO43175 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.87■□□□□ 0.45
PHGDHO43175 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PHGDHO43175 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PHGDHO43175 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PHGDHO43175 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PHGDHO43175 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
PHGDHO43175 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PHGDHO43175 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.86■□□□□ 0.45
PHGDHO43175 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
PHGDHO43175 LINC00602-201ENST00000629776 2065 ntBASIC17.86■□□□□ 0.45
PHGDHO43175 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
PHGDHO43175 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.86■□□□□ 0.45
PHGDHO43175 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.86■□□□□ 0.45
PHGDHO43175 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.86■□□□□ 0.45
PHGDHO43175 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.86■□□□□ 0.45
PHGDHO43175 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.86■□□□□ 0.45
PHGDHO43175 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PHGDHO43175 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.86■□□□□ 0.45
PHGDHO43175 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.86■□□□□ 0.45
PHGDHO43175 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.86■□□□□ 0.45
PHGDHO43175 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PHGDHO43175 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.86■□□□□ 0.45
PHGDHO43175 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.86■□□□□ 0.45
PHGDHO43175 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHGDHO43175 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHGDHO43175 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PHGDHO43175 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHGDHO43175 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PHGDHO43175 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHGDHO43175 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHGDHO43175 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHGDHO43175 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHGDHO43175 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.85■□□□□ 0.45
PHGDHO43175 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PHGDHO43175 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PHGDHO43175 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.85■□□□□ 0.45
PHGDHO43175 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.85■□□□□ 0.45
PHGDHO43175 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.85■□□□□ 0.45
PHGDHO43175 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.85■□□□□ 0.45
PHGDHO43175 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHGDHO43175 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PHGDHO43175 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.85■□□□□ 0.45
PHGDHO43175 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PHGDHO43175 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.85■□□□□ 0.45
PHGDHO43175 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PHGDHO43175 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.85■□□□□ 0.45
PHGDHO43175 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
PHGDHO43175 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.85■□□□□ 0.45
PHGDHO43175 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.85■□□□□ 0.45
PHGDHO43175 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.85■□□□□ 0.45
PHGDHO43175 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHGDHO43175 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
PHGDHO43175 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PHGDHO43175 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms