Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 FAM87A-204ENST00000613235 858 ntBASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CPSF4LA6NMK7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CPSF4LA6NMK7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CPSF4LA6NMK7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.58■□□□□ 0.25
CPSF4LA6NMK7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.58■□□□□ 0.25
CPSF4LA6NMK7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
CPSF4LA6NMK7 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.58■□□□□ 0.25
CPSF4LA6NMK7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPSF4LA6NMK7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 CROCCP1-201ENST00000426910 5675 ntBASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 HMGA1P5-201ENST00000412453 271 ntBASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 AC100803.2-201ENST00000562459 1963 ntBASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPSF4LA6NMK7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 AL512604.3-201ENST00000569583 964 ntBASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 AC092865.7-201ENST00000641832 219 ntBASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms