Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 AC079328.2-201ENST00000561241 3354 ntBASIC14.56□□□□□ -0.08
LINC00862A6NCI5 LINC00304-203ENST00000565008 1864 ntBASIC14.56□□□□□ -0.08
LINC00862A6NCI5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 RBM17P2-201ENST00000616397 1405 ntBASIC14.56□□□□□ -0.08
LINC00862A6NCI5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00862A6NCI5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 TSPY21P-201ENST00000433481 731 ntBASIC14.55□□□□□ -0.08
LINC00862A6NCI5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 RNF216P1-203ENST00000404404 2427 ntBASIC14.55□□□□□ -0.08
LINC00862A6NCI5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 CICP14-201ENST00000629111 2732 ntBASIC14.55□□□□□ -0.08
LINC00862A6NCI5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 SNX18-202ENST00000343017 3140 ntBASIC14.55□□□□□ -0.08
LINC00862A6NCI5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00862A6NCI5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.54□□□□□ -0.08
LINC00862A6NCI5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 AC023632.3-201ENST00000521633 145 ntBASIC14.54□□□□□ -0.08
LINC00862A6NCI5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 HLA-J-201ENST00000462773 1622 ntBASIC14.54□□□□□ -0.08
LINC00862A6NCI5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00862A6NCI5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms