Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV5A0A0B4J1U4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 AC096633.1-201ENST00000422446 749 ntBASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV5A0A0B4J1U4 AC093677.2-201ENST00000600169 1863 ntBASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 KRT8P47-201ENST00000604727 1398 ntBASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV5A0A0B4J1U4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 AL138781.2-201ENST00000617896 1843 ntBASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV5A0A0B4J1U4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms