Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 AC007967.3-201ENST00000434308 558 ntBASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 AC018712.1-201ENST00000455767 687 ntBASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.82■□□□□ 0.44
TBC1D3DA0A087WVF3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 AC022898.2-201ENST00000616822 1312 ntBASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 AC093010.1-201ENST00000473625 1624 ntBASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3DA0A087WVF3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 AL356309.3-201ENST00000624132 1934 ntBASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 HNRNPDP1-201ENST00000439535 754 ntBASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 SART3-203ENST00000546611 1184 ntBASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3DA0A087WVF3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 WIZP1-201ENST00000531444 2299 ntBASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms