Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 ACTG1P4-201ENST00000425123 1122 ntBASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 MIR3687-2-201ENST00000577708 61 ntBASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 MIR3687-1-201ENST00000614492 61 ntBASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 AC134684.3-201ENST00000641758 218 ntBASIC18.55■□□□□ 0.56
MTCL1Q9Y4B5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MTCL1Q9Y4B5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 SPDYE21P-201ENST00000413323 827 ntBASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 AC254562.1-201ENST00000417586 456 ntBASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 AL096828.2-201ENST00000567259 1965 ntBASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 DDX43P3-201ENST00000441064 443 ntBASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.53■□□□□ 0.56
MTCL1Q9Y4B5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 AL020989.1-201ENST00000422979 469 ntBASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 AC064836.3-201ENST00000607928 673 ntBASIC18.52■□□□□ 0.56
MTCL1Q9Y4B5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.52■□□□□ 0.55
MTCL1Q9Y4B5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MTCL1Q9Y4B5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
MTCL1Q9Y4B5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MTCL1Q9Y4B5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 STK19B-204ENST00000512515 211 ntBASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 AC008667.4-201ENST00000607370 168 ntBASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 AL589182.2-201ENST00000619332 1049 ntBASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MTCL1Q9Y4B5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms