Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 UPK3BP1-201ENST00000428678 509 ntBASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 ATP5G2P1-201ENST00000433580 426 ntBASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 AC011840.4-201ENST00000578471 627 ntBASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 AC068880.1-201ENST00000507289 2297 ntBASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 AC246785.2-201ENST00000432512 513 ntBASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 AC093458.2-201ENST00000623150 629 ntBASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 AC006116.8-202ENST00000587620 1550 ntBASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHA4Q9UN74 AL133373.2-201ENST00000623187 2828 ntBASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 AC091607.1-201ENST00000490318 1060 ntBASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA4Q9UN74 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 AC009949.1-201ENST00000623048 1830 ntBASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA4Q9UN74 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms