Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 FAM86EP-206ENST00000510506 987 ntBASIC15.72■□□□□ 0.11
CDH20Q9HBT6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 AC005332.3-201ENST00000589904 676 ntBASIC15.72■□□□□ 0.11
CDH20Q9HBT6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 AC004263.2-201ENST00000617183 678 ntBASIC15.72■□□□□ 0.11
CDH20Q9HBT6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 Z83836.1-201ENST00000624605 1642 ntBASIC15.72■□□□□ 0.11
CDH20Q9HBT6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH20Q9HBT6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 AC091076.1-201ENST00000610741 619 ntBASIC15.71■□□□□ 0.11
CDH20Q9HBT6 AP000550.4-202ENST00000639755 178 ntBASIC15.71■□□□□ 0.11
CDH20Q9HBT6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 AL353692.3-201ENST00000407031 1396 ntBASIC15.71■□□□□ 0.11
CDH20Q9HBT6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.71■□□□□ 0.11
CDH20Q9HBT6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH20Q9HBT6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.71■□□□□ 0.1
CDH20Q9HBT6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
CDH20Q9HBT6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CDH20Q9HBT6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH20Q9HBT6 LINC00602-201ENST00000629776 2065 ntBASIC15.71■□□□□ 0.1
CDH20Q9HBT6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CDH20Q9HBT6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms