Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 AP000523.1-201ENST00000398242 1049 ntBASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 PVRIG2P-201ENST00000435460 978 ntBASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 AL157888.1-201ENST00000631930 593 ntBASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 ECEL1P3-201ENST00000427961 737 ntBASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 LINC00167-201ENST00000530583 1419 ntBASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM1Q9HBL6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 LINC01568-207ENST00000641790 1380 ntBASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM1Q9HBL6 AC139713.2-201ENST00000641328 2723 ntBASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms