Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BRF2Q9HAW0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.2■□□□□ 0.34
BRF2Q9HAW0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BRF2Q9HAW0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
BRF2Q9HAW0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
BRF2Q9HAW0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.2■□□□□ 0.34
BRF2Q9HAW0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.19■□□□□ 0.34
BRF2Q9HAW0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 MIR662-201ENST00000384847 95 ntBASIC17.18■□□□□ 0.34
BRF2Q9HAW0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 AC004263.2-201ENST00000617183 678 ntBASIC17.18■□□□□ 0.34
BRF2Q9HAW0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BRF2Q9HAW0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 IGHGP-201ENST00000390555 1178 ntBASIC17.17■□□□□ 0.34
BRF2Q9HAW0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 AK4P3-201ENST00000418260 669 ntBASIC17.17■□□□□ 0.34
BRF2Q9HAW0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 DDX43P3-201ENST00000441064 443 ntBASIC17.17■□□□□ 0.34
BRF2Q9HAW0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 AC092597.1-201ENST00000487352 616 ntBASIC17.17■□□□□ 0.34
BRF2Q9HAW0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.17■□□□□ 0.34
BRF2Q9HAW0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms