Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 REXO1L11P-201ENST00000620964 1927 ntBASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 MMP23A-201ENST00000234610 1017 ntBASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 HMGA1P5-201ENST00000412453 271 ntBASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 AP006294.2-201ENST00000641667 209 ntBASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 AC009949.1-201ENST00000623048 1830 ntBASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TUBB1Q9H4B7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBB1Q9H4B7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 ECEL1P3-201ENST00000427961 737 ntBASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB1Q9H4B7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms