Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 LINC02560-201ENST00000596379 459 ntBASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3BQ96NU0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 UGT1A2P-201ENST00000454886 866 ntBASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 AC008761.3-201ENST00000624803 892 ntBASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 AL513210.1-201ENST00000629608 234 ntBASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 AP001271.2-201ENST00000624018 1556 ntBASIC17.11■□□□□ 0.33
CNTNAP3BQ96NU0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 AC004461.1-201ENST00000412461 403 ntBASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 NME2P1-201ENST00000426182 414 ntBASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 KRT18P27-201ENST00000427733 1299 ntBASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.1■□□□□ 0.33
CNTNAP3BQ96NU0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms